As the rest of annelids, they exhibit two presegmental regions, the prostomium and peristomium, a segmented trunk and a postsegmental pygidium. Several evidence date the origin of polychaetes in the Cambrian era (around 500 millions before present), but some fossil records of larvae from Pre-Cambrian eras show features resembling polychaete larvae.
The nuchal organs, a pair of chemosensory structures on the postero-lateral margin of the prostomium, are apparently the only synapomorphic trait of the Polychaeta distinguishes them from other Annelida.